Lab activities - JMP version

Hints for downloading and accessing files

JMP online help

Lab 1: 28 Aug

• Lab 1 activities Read this first
• Lab 1 data sheet for rocks and randomization exercises
• Introduction to JMP and data description

Lab 2: 4 Sept

• Numerical and Graphical summaries
• Reading space delimited files, Randomization test
• Randomization test add-in
• Lab 2 self assessment

Lab 3: 11 Sept

• Journals, Two-sample t-test
• Computing T quantiles
• Tquantile.jmp The JMP worksheet to compute T quantiles
• Lab 3 self assessment

Lab 4: 18 Sept

• paired data and nonparametric tests.
• Self assessment on paired data.
• Self assessment on Wilcoxon rank sum test

Lab 5: 25 Sept

• transformations, plotting residuals and drawing QQ plots
• hamburger.xlsx for instructions on transformations
• averaging values within groups of observations (Labelled Lab 6 on the document)
• patty.txt Hamburger patty data with multiple measurements
• Lab 5 Self assessment
• fishprice.csv fish price data (wide format) for self assessment
• fishlong.csv fish price data (long format) for self assessment

Lab 6: 2 Oct. Self assessment on choosing an analysis, material for HW after the exam

• Self assessment on choosing an analysis
• Answers to the self assessment on choosing an analysis
• alanine.csv Data set for Lab 6 self assessment

• Analysis of proportions
• vitc.txt Data for Vitamin C study
• vitclong.csv Data for Vitamin C study, long format

Lab 7: 16 Oct

• JMP instructions for lab 7 Explanation of modeling type, fitting ANOVA models and after the ANOVA analyses in JMP
• case0501.csv, Data for mouse diet/longevity study
• Lab 7 self assessment
• teaching.csv data file for Lab 7 self assessment

Lab 8: 23 Oct

• Material on multiple comparisons is in lab 7.
• FDR adjustment, for large numbers of responses
• manyY.csv Data file with raw data for fdr adjustment
• Introduction to linear regression
• meat.txt Data file for the introduction to linear regression
• Lab 8 self assessment
• teaching.csv data file for multiple comparisons part of lab 8 self assessment (same data used in lab 7 self assessment)
• beeCounts.csv Raw data for fdr part of lab 8 self assessment, needed by JMP users
• gfclocks.csv Data file for linear regression part of lab 8 self assessment

Lab 9: 30 Oct

• Lab 9 Fitting a linear regresion, tools for linear regression
• meat.txt Meat pH over time data set.
• Self assessment on linear regression, updated
• GFCLOCKS.txt data file for self assessment (now with spaces, not tabs, between values)
  gfclocks.csv data file for self assessment in csv format

Lab 10: 6 Nov

• Self assessment on choosing transformations and interpreting results
• bees.csv Data file for self assessment on transformations
• Fitting a logistic regression
• donner.csv Data file for Donner party logistic regression
• Self assessment on logistic regression
• sparrow2.csv Data for self assessment on logistic regresion

Non-lab: 15 Nov

• Intro to Multiple regression:
  scatterplot matrices,
  correlations,
  using Fit Model for regressions,
  

Lab 11: 20 Nov

• Multiple regression: lots of topics:
  scatterplot matrices,
  correlations,
  using Fit Model for regressions,
  creating quadratic and product terms,
  creating indicator variables for groups
• Diagnostics for multiple regression.
• brain.txt Data set for multiple regression
• light.txt Data set for categorical variables part of multiple regression material.
• Lab 11 self assessment
• tamsales1.csv Data file for self assessment, prices in $1000's